Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA3A0PJX4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.74■□□□□ 0.59
SHISA3A0PJX4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 ABHD17AP5-201ENST00000580133 923 ntBASIC18.73■□□□□ 0.59
SHISA3A0PJX4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA3A0PJX4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 PKD1P6-201ENST00000343738 4769 ntBASIC18.72■□□□□ 0.59
SHISA3A0PJX4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 MIR6722-201ENST00000617286 78 ntBASIC18.72■□□□□ 0.59
SHISA3A0PJX4 AC074183.2-201ENST00000623112 922 ntBASIC18.72■□□□□ 0.59
SHISA3A0PJX4 C17orf82-201ENST00000623772 1530 ntBASIC18.72■□□□□ 0.59
SHISA3A0PJX4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA3A0PJX4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 AC009102.2-201ENST00000606772 1639 ntBASIC18.71■□□□□ 0.59
SHISA3A0PJX4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA3A0PJX4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
SHISA3A0PJX4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 AL049796.1-201ENST00000565336 1766 ntBASIC18.69■□□□□ 0.58
SHISA3A0PJX4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 AC004987.1-201ENST00000428627 508 ntBASIC18.69■□□□□ 0.58
SHISA3A0PJX4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 AC104564.3-201ENST00000582367 638 ntBASIC18.69■□□□□ 0.58
SHISA3A0PJX4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHISA3A0PJX4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA3A0PJX4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms