Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 AC004812.2-201ENST00000611079 2094 ntBASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC163A0A0D9SF12 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
CCDC163A0A0D9SF12 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 MYC-209ENST00000641252 345 ntBASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC163A0A0D9SF12 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 AC097658.1-201ENST00000475555 843 ntBASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 AL162412.1-201ENST00000567129 965 ntBASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC163A0A0D9SF12 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 LINC01124-201ENST00000409786 2117 ntBASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 DUSP5P2-201ENST00000426873 1033 ntBASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 GCSHP5-201ENST00000443090 522 ntBASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 RPS2P52-201ENST00000469610 820 ntBASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 RARRES2P4-201ENST00000514074 484 ntBASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC163A0A0D9SF12 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC093787.1-201ENST00000450396 207 ntBASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC098590.1-201ENST00000468126 897 ntBASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC083880.1-201ENST00000608266 535 ntBASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 AC120498.10-201ENST00000621827 505 ntBASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC163A0A0D9SF12 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC163A0A0D9SF12 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms