Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 NTF6A-201ENST00000591175 560 ntBASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 ATP5G2P3-201ENST00000429083 425 ntBASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV1-2A0A0B4J238 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 AL499627.2-201ENST00000606283 725 ntBASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV1-2A0A0B4J238 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 AC004987.1-201ENST00000428627 508 ntBASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 AL031602.1-201ENST00000633169 911 ntBASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV1-2A0A0B4J238 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV1-2A0A0B4J238 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
TRAV1-2A0A0B4J238 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV1-2A0A0B4J238 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 AL049796.1-201ENST00000565336 1766 ntBASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 HSD17B1P1-201ENST00000590052 955 ntBASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 OR7E47P-201ENST00000546390 1422 ntBASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV1-2A0A0B4J238 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms