Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 FKBP9P1-201ENST00000441699 1491 ntBASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 IL1RAP-207ENST00000422485 2048 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 GHRL-202ENST00000335542 1425 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 RPAP1-201ENST00000304330 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 JPT2-202ENST00000382710 962 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL356417.2-201ENST00000419064 395 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 IFT22-204ENST00000437644 875 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AC079154.1-201ENST00000438816 542 ntTSL 4 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 RN7SL229P-201ENST00000495651 299 ntBASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 DENND5B-AS1-202ENST00000537346 1106 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 HCG18-241ENST00000602290 821 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL513485.1-201ENST00000617915 845 ntBASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL031601.2-201ENST00000622823 457 ntTSL 3 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 FAM92A-206ENST00000518322 4241 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 IMPDH1P11-201ENST00000567885 1504 ntBASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 NTM-221ENST00000539799 2550 ntTSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AL354674.1-201ENST00000585222 1780 ntBASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 TUBA1A-207ENST00000550767 1384 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 LAMP3-202ENST00000466939 1453 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NPIPA3F8WFD2 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 SIGLEC20P-201ENST00000595243 1311 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AP003559.1-201ENST00000540906 1831 ntTSL 3 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AP001972.5-201ENST00000624624 2338 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CAPN9-203ENST00000366666 2173 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 FCGR1A-201ENST00000369168 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 CLIP4-203ENST00000401617 2162 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC092902.5-201ENST00000641650 3256 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PKP2-201ENST00000070846 4241 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 GNAS-209ENST00000371081 730 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 SNORA80B-201ENST00000383906 136 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 ZFX-AS1-201ENST00000427551 417 ntTSL 3 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC006987.2-201ENST00000434709 527 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AL450998.3-203ENST00000453804 645 ntTSL 3 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 HSD3BP2-201ENST00000457615 1118 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC112694.1-202ENST00000540985 943 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AL031058.1-201ENST00000561592 888 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 TMEM159-204ENST00000572258 584 ntTSL 3 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 MIR3183-201ENST00000578566 84 ntBASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 AC005154.1-229ENST00000580440 791 ntTSL 2 BASIC10.86□□□□□ -0.67
NPIPA3F8WFD2 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms