Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC253536.5-201ENST00000506097 347 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 DIS3L2P1-201ENST00000509197 559 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AC026495.1-201ENST00000556397 530 ntTSL 4 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AC010422.2-201ENST00000593554 635 ntTSL 3 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 NEK4P3-201ENST00000604859 544 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 AL627230.4-201ENST00000617851 370 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AL121832.1-204ENST00000622414 548 ntTSL 3 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AL357143.1-203ENST00000639750 881 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 CSPG4P4Y-201ENST00000333235 3724 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 CSPG4P3Y-201ENST00000418188 3724 ntBASIC12.49□□□□□ -0.41
SLC1A1P43005 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 WDR62-201ENST00000270301 4632 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 TSTD2-201ENST00000341170 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 FAM69A-201ENST00000370310 2574 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 OSBPL9-213ENST00000486942 2529 ntTSL 2 BASIC12.49□□□□□ -0.41
SLC1A1P43005 TMEM69-201ENST00000372025 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SLC1A1P43005 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC12.49□□□□□ -0.41
SLC1A1P43005 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SLC1A1P43005 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 FBXO3-202ENST00000448981 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 AL031846.2-201ENST00000624656 3671 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 LONRF2-202ENST00000409647 2363 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 PAK6-213ENST00000560346 4020 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SLC1A1P43005 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 MRO-205ENST00000436348 1125 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 RN7SL268P-201ENST00000491172 298 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC12.48□□□□□ -0.41
SLC1A1P43005 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 IGHV1OR16-3-201ENST00000568138 205 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SLC1A1P43005 AL078624.1-201ENST00000604004 547 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 RN7SL827P-201ENST00000607480 288 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 PPP1R26P3-201ENST00000612861 3800 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 MIR6756-201ENST00000616240 63 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 MIR6727-201ENST00000620702 65 ntBASIC12.48□□□□□ -0.41
SLC1A1P43005 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 RASGRP4-201ENST00000293062 2926 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 RASGRP4-203ENST00000433821 2941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 RASGRP4-218ENST00000617966 2927 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 NEK10-204ENST00000383771 2023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 CELF5-203ENST00000541430 4268 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 LRRC46-201ENST00000269025 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 MAGEC3-201ENST00000298296 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 POTED-201ENST00000299443 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 PLA2G4C-201ENST00000354276 2496 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC12.48□□□□□ -0.41
SLC1A1P43005 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 ZNF18-202ENST00000454073 2261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SLC1A1P43005 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC12.48□□□□□ -0.41
SLC1A1P43005 GYG1-210ENST00000484197 1563 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SLC1A1P43005 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.47□□□□□ -0.41
SLC1A1P43005 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SLC1A1P43005 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SLC1A1P43005 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms