Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 AC015818.9-201ENST00000591705 4582 ntBASIC12.58□□□□□ -0.4
MTHFRP42898 TMEM263-209ENST00000551813 1483 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MTHFRP42898 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MTHFRP42898 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
MTHFRP42898 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
MTHFRP42898 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 AC009533.1-201ENST00000539757 3158 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 AC126323.1-203ENST00000562306 2579 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 AP000350.2-201ENST00000439492 1763 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 LINC00454-201ENST00000425483 503 ntTSL 3 BASIC12.57□□□□□ -0.4
MTHFRP42898 PDHX-202ENST00000430469 952 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 ARHGAP26-AS1-202ENST00000433595 978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 AL450063.1-201ENST00000441775 244 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 AL161672.1-201ENST00000450968 818 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 RN7SL617P-201ENST00000485298 308 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 AC136628.2-201ENST00000505650 1142 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 LINC00290-201ENST00000512487 593 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 HINT1-208ENST00000513012 583 ntTSL 4 BASIC12.57□□□□□ -0.4
MTHFRP42898 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 AC079385.2-201ENST00000547531 863 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC12.57□□□□□ -0.4
MTHFRP42898 LAMTOR5-AS1-234ENST00000625584 508 ntTSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 CICP7-201ENST00000432723 2477 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 C16orf46-201ENST00000299578 1605 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
MTHFRP42898 CICP19-201ENST00000632944 2357 ntBASIC12.57□□□□□ -0.4
MTHFRP42898 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
MTHFRP42898 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC12.57□□□□□ -0.4
MTHFRP42898 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MTHFRP42898 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 AC005531.1-201ENST00000520729 1360 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MTHFRP42898 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 FOXD2-AS1-201ENST00000445551 2509 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 AL138899.1-201ENST00000415019 1999 ntTSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 GHRL-202ENST00000335542 1425 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 PROKR2-201ENST00000217270 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MTHFRP42898 HNRNPA1P61-201ENST00000342073 924 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 CIDECP-203ENST00000424691 1088 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 FRG2B-201ENST00000425520 890 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 AC007128.2-201ENST00000435967 557 ntTSL 4 BASIC12.56□□□□□ -0.4
MTHFRP42898 AL139220.1-201ENST00000436802 520 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 SLC25A38P1-201ENST00000458247 943 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 AC113410.2-201ENST00000507389 678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 AL732372.3-201ENST00000514436 1239 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
MTHFRP42898 SAA2-204ENST00000528349 948 ntTSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 LINC02253-202ENST00000560314 565 ntTSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC12.56□□□□□ -0.4
MTHFRP42898 ZNF814-205ENST00000595295 909 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms