Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC6Q9Y625 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 AL391422.3-201ENST00000603791 2761 ntBASIC20.27■□□□□ 0.84
GPC6Q9Y625 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 MIR4466-201ENST00000606121 54 ntBASIC20.27■□□□□ 0.84
GPC6Q9Y625 AC092171.4-201ENST00000609130 632 ntBASIC20.27■□□□□ 0.84
GPC6Q9Y625 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GPC6Q9Y625 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC6Q9Y625 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC6Q9Y625 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC6Q9Y625 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC6Q9Y625 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.27■□□□□ 0.83
GPC6Q9Y625 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
GPC6Q9Y625 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GPC6Q9Y625 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC6Q9Y625 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC6Q9Y625 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC6Q9Y625 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC6Q9Y625 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC6Q9Y625 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
GPC6Q9Y625 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC6Q9Y625 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
GPC6Q9Y625 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC6Q9Y625 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GPC6Q9Y625 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC6Q9Y625 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.23■□□□□ 0.83
GPC6Q9Y625 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 FBXW4P1-201ENST00000426721 2239 ntBASIC20.23■□□□□ 0.83
GPC6Q9Y625 AC008406.3-201ENST00000620001 1374 ntBASIC20.23■□□□□ 0.83
GPC6Q9Y625 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
GPC6Q9Y625 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GPC6Q9Y625 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GPC6Q9Y625 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.23■□□□□ 0.83
GPC6Q9Y625 AL136116.3-201ENST00000402907 1138 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms