Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDC42BPBQ9Y5S2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
CDC42BPBQ9Y5S2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC33.01■■■□□ 2.87
CDC42BPBQ9Y5S2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC33.01■■■□□ 2.87
CDC42BPBQ9Y5S2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 AC008687.6-201ENST00000596318 630 ntBASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDC42BPBQ9Y5S2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 AP004607.7-201ENST00000527152 1677 ntBASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 AC079089.2-201ENST00000531211 1277 ntBASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 AC133041.1-202ENST00000642053 222 ntBASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDC42BPBQ9Y5S2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPBQ9Y5S2 AP006587.3-201ENST00000525742 1516 ntBASIC32.98■■■□□ 2.87
CDC42BPBQ9Y5S2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC32.98■■■□□ 2.87
CDC42BPBQ9Y5S2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CDC42BPBQ9Y5S2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC32.98■■■□□ 2.87
CDC42BPBQ9Y5S2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 AC083880.1-201ENST00000608266 535 ntBASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 ITM2C-210ENST00000620962 501 ntBASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 SLC7A5P1-201ENST00000568957 537 ntBASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC32.97■■■□□ 2.87
CDC42BPBQ9Y5S2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 POU5F1P3-201ENST00000428824 1078 ntBASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CDC42BPBQ9Y5S2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 AC098590.1-201ENST00000468126 897 ntBASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDC42BPBQ9Y5S2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CDC42BPBQ9Y5S2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CDC42BPBQ9Y5S2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDC42BPBQ9Y5S2 DET1-205ENST00000558413 583 ntTSL 4 BASIC32.94■■■□□ 2.86
CDC42BPBQ9Y5S2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC32.94■■■□□ 2.86
CDC42BPBQ9Y5S2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CDC42BPBQ9Y5S2 MKRN4P-201ENST00000444706 1521 ntBASIC32.93■■■□□ 2.86
CDC42BPBQ9Y5S2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC32.93■■■□□ 2.86
CDC42BPBQ9Y5S2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC32.93■■■□□ 2.86
CDC42BPBQ9Y5S2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPBQ9Y5S2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPBQ9Y5S2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 RNA5SP413-201ENST00000516373 109 ntBASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 AL034346.1-201ENST00000568244 1277 ntBASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
CDC42BPBQ9Y5S2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 ANOS2P-203ENST00000472227 1816 ntBASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 PPP1R14BP2-201ENST00000426284 444 ntBASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 LINC00526-201ENST00000581067 1875 ntBASIC32.9■■■□□ 2.86
CDC42BPBQ9Y5S2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms