Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHA9Q9Y5H5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 OR2I1P-207ENST00000453522 948 ntBASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 AC011298.3-201ENST00000615796 283 ntBASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 AC008406.3-201ENST00000620001 1374 ntBASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHA9Q9Y5H5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 CA15P2-201ENST00000611168 834 ntBASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 AL031602.1-201ENST00000633169 911 ntBASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 SLC25A24-204ENST00000569674 2357 ntBASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHA9Q9Y5H5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 AC136469.2-201ENST00000623944 1028 ntBASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHA9Q9Y5H5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHA9Q9Y5H5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHA9Q9Y5H5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms