Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA4Q9Y5G9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 ID1-201ENST00000376105 1233 ntBASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 MIR6084-201ENST00000622012 110 ntBASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHGA4Q9Y5G9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 OR2I1P-207ENST00000453522 948 ntBASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 IGHV3-19-201ENST00000521488 291 ntBASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA4Q9Y5G9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 AC012414.1-201ENST00000556676 535 ntBASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA4Q9Y5G9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 MIR572-201ENST00000384983 95 ntBASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHGA4Q9Y5G9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 CCDC92B-201ENST00000575506 885 ntBASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 AL354811.1-201ENST00000610286 706 ntBASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGA4Q9Y5G9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PCDHGA4Q9Y5G9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHGA4Q9Y5G9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA4Q9Y5G9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA4Q9Y5G9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms