Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 AC138907.5-202ENST00000569484 235 ntBASIC28.33■■■□□ 2.13
SPG7Q9UQ90 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SPG7Q9UQ90 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 KRT18P20-201ENST00000548986 1279 ntBASIC28.32■■■□□ 2.12
SPG7Q9UQ90 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPG7Q9UQ90 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPG7Q9UQ90 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPG7Q9UQ90 OR7E47P-201ENST00000546390 1422 ntBASIC28.3■■■□□ 2.12
SPG7Q9UQ90 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.3■■■□□ 2.12
SPG7Q9UQ90 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.3■■■□□ 2.12
SPG7Q9UQ90 CD99P1-205ENST00000527459 561 ntBASIC28.3■■■□□ 2.12
SPG7Q9UQ90 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.3■■■□□ 2.12
SPG7Q9UQ90 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPG7Q9UQ90 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 CNN2P6-201ENST00000439038 900 ntBASIC28.28■■■□□ 2.12
SPG7Q9UQ90 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPG7Q9UQ90 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 AL034346.1-201ENST00000568244 1277 ntBASIC28.27■■■□□ 2.12
SPG7Q9UQ90 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 AC010536.3-201ENST00000620306 533 ntBASIC28.27■■■□□ 2.12
SPG7Q9UQ90 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SPG7Q9UQ90 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SPG7Q9UQ90 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SPG7Q9UQ90 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 SLC29A4P1-201ENST00000398760 971 ntBASIC28.26■■■□□ 2.11
SPG7Q9UQ90 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
SPG7Q9UQ90 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 AL138781.1-201ENST00000566567 1274 ntBASIC28.25■■■□□ 2.11
SPG7Q9UQ90 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPG7Q9UQ90 LINC00526-201ENST00000581067 1875 ntBASIC28.25■■■□□ 2.11
SPG7Q9UQ90 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 TMEM191A-211ENST00000637163 1067 ntBASIC28.24■■■□□ 2.11
SPG7Q9UQ90 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SPG7Q9UQ90 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPG7Q9UQ90 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms