Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SHANK2Q9UPX8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SHANK2Q9UPX8 KRT18P20-201ENST00000548986 1279 ntBASIC32.38■■■□□ 2.77
SHANK2Q9UPX8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC32.38■■■□□ 2.77
SHANK2Q9UPX8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC32.38■■■□□ 2.77
SHANK2Q9UPX8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 TSPY20P-201ENST00000450910 630 ntBASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SHANK2Q9UPX8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC32.36■■■□□ 2.77
SHANK2Q9UPX8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC32.36■■■□□ 2.77
SHANK2Q9UPX8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC32.36■■■□□ 2.77
SHANK2Q9UPX8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SHANK2Q9UPX8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
SHANK2Q9UPX8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
SHANK2Q9UPX8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 GPX1P1-201ENST00000388829 606 ntBASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SHANK2Q9UPX8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC32.33■■■□□ 2.77
SHANK2Q9UPX8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SHANK2Q9UPX8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SHANK2Q9UPX8 AC005181.1-201ENST00000604782 1256 ntBASIC32.33■■■□□ 2.77
SHANK2Q9UPX8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
SHANK2Q9UPX8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
SHANK2Q9UPX8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 APTR-203ENST00000430801 583 ntTSL 5 BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 AL121832.2-201ENST00000610979 668 ntBASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SHANK2Q9UPX8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 TSPY6P-201ENST00000448518 926 ntBASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC32.31■■■□□ 2.76
SHANK2Q9UPX8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 AC087742.1-201ENST00000575880 1738 ntBASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 AC010536.3-201ENST00000620306 533 ntBASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SHANK2Q9UPX8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 AC007322.1-201ENST00000426983 750 ntBASIC32.29■■■□□ 2.76
SHANK2Q9UPX8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SHANK2Q9UPX8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms