Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGB4Q9UN71 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGB4Q9UN71 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGB4Q9UN71 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PCDHGB4Q9UN71 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGB4Q9UN71 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 AL451085.2-201ENST00000605085 799 ntBASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 C17orf82-201ENST00000623772 1530 ntBASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGB4Q9UN71 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MIR6724-1-201ENST00000616420 92 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MIR6724-2-201ENST00000616483 92 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MIR6724-4-201ENST00000617390 92 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MIR6724-3-201ENST00000622482 92 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 FAM99A-202ENST00000538190 1989 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 AC004687.1-201ENST00000579003 1625 ntBASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGB4Q9UN71 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGB4Q9UN71 AL157384.1-201ENST00000445995 2473 ntBASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 AL117332.1-201ENST00000622628 974 ntBASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB4Q9UN71 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB4Q9UN71 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB4Q9UN71 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms