Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 KRT18P61-201ENST00000585825 1298 ntBASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
UBQLN1Q9UMX0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 AC004854.2-201ENST00000608450 1441 ntBASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
UBQLN1Q9UMX0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
UBQLN1Q9UMX0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
UBQLN1Q9UMX0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
UBQLN1Q9UMX0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
UBQLN1Q9UMX0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
UBQLN1Q9UMX0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
UBQLN1Q9UMX0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
UBQLN1Q9UMX0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 KRT87P-202ENST00000534226 1464 ntBASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 IKBKGP1-201ENST00000612193 1073 ntBASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 AP006587.3-201ENST00000525742 1516 ntBASIC23.13■■□□□ 1.29
UBQLN1Q9UMX0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.12■■□□□ 1.29
UBQLN1Q9UMX0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms