Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EBF1Q9UH73 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
EBF1Q9UH73 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
EBF1Q9UH73 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
EBF1Q9UH73 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
EBF1Q9UH73 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
EBF1Q9UH73 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EBF1Q9UH73 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
EBF1Q9UH73 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
EBF1Q9UH73 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.95■■□□□ 1.1
EBF1Q9UH73 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.95■■□□□ 1.1
EBF1Q9UH73 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.95■■□□□ 1.1
EBF1Q9UH73 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EBF1Q9UH73 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EBF1Q9UH73 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
EBF1Q9UH73 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
EBF1Q9UH73 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.94■■□□□ 1.1
EBF1Q9UH73 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.94■■□□□ 1.1
EBF1Q9UH73 TMEM191A-211ENST00000637163 1067 ntBASIC21.94■■□□□ 1.1
EBF1Q9UH73 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EBF1Q9UH73 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.94■■□□□ 1.1
EBF1Q9UH73 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EBF1Q9UH73 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
EBF1Q9UH73 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
EBF1Q9UH73 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.94■■□□□ 1.1
EBF1Q9UH73 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EBF1Q9UH73 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
EBF1Q9UH73 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
EBF1Q9UH73 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.93■■□□□ 1.1
EBF1Q9UH73 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.93■■□□□ 1.1
EBF1Q9UH73 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.93■■□□□ 1.1
EBF1Q9UH73 AC142086.2-201ENST00000569753 217 ntBASIC21.93■■□□□ 1.1
EBF1Q9UH73 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
EBF1Q9UH73 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.93■■□□□ 1.1
EBF1Q9UH73 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
EBF1Q9UH73 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
EBF1Q9UH73 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.92■■□□□ 1.1
EBF1Q9UH73 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.92■■□□□ 1.1
EBF1Q9UH73 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
EBF1Q9UH73 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
EBF1Q9UH73 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
EBF1Q9UH73 MFSD11-216ENST00000590393 1141 ntBASIC21.92■■□□□ 1.1
EBF1Q9UH73 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
EBF1Q9UH73 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
EBF1Q9UH73 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.91■■□□□ 1.1
EBF1Q9UH73 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
EBF1Q9UH73 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 DUSP8P5-201ENST00000422884 1815 ntBASIC21.9■■□□□ 1.1
EBF1Q9UH73 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
EBF1Q9UH73 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
EBF1Q9UH73 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
EBF1Q9UH73 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EBF1Q9UH73 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
EBF1Q9UH73 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
EBF1Q9UH73 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EBF1Q9UH73 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EBF1Q9UH73 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
EBF1Q9UH73 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
EBF1Q9UH73 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF1Q9UH73 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 CD99P1-205ENST00000527459 561 ntBASIC21.89■■□□□ 1.09
EBF1Q9UH73 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 AL121832.2-201ENST00000610979 668 ntBASIC21.89■■□□□ 1.09
EBF1Q9UH73 AC231657.2-201ENST00000624556 255 ntBASIC21.89■■□□□ 1.09
EBF1Q9UH73 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
EBF1Q9UH73 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF1Q9UH73 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
EBF1Q9UH73 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
EBF1Q9UH73 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms