Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 LINC01529-204ENST00000636474 1715 ntBASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NCKIPSDQ9NZQ3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 C11orf96-202ENST00000528572 1834 ntBASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 AC087742.1-201ENST00000575880 1738 ntBASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKIPSDQ9NZQ3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NCKIPSDQ9NZQ3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 AC012414.1-201ENST00000556676 535 ntBASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 AC080038.3-201ENST00000623346 1952 ntBASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NCKIPSDQ9NZQ3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 AP005435.1-201ENST00000529293 1178 ntBASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKIPSDQ9NZQ3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 AL137784.2-201ENST00000607332 1000 ntBASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKIPSDQ9NZQ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKIPSDQ9NZQ3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NCKIPSDQ9NZQ3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms