Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 KRT18P14-201ENST00000534205 1250 ntBASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPHK1Q9NYA1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 AC034268.1-201ENST00000441047 882 ntBASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPHK1Q9NYA1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 AL162430.1-201ENST00000480705 870 ntBASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
SPHK1Q9NYA1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPHK1Q9NYA1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.77■□□□□ 0.91
SPHK1Q9NYA1 AC005224.4-201ENST00000583262 1652 ntBASIC20.77■□□□□ 0.91
SPHK1Q9NYA1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPHK1Q9NYA1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 AC009237.3-201ENST00000393279 1427 ntBASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPHK1Q9NYA1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.74■□□□□ 0.91
SPHK1Q9NYA1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPHK1Q9NYA1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms