Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 MIR4449-201ENST00000578365 66 ntBASIC20.78■□□□□ 0.92
NDE1Q9NXR1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NDE1Q9NXR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NDE1Q9NXR1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.77■□□□□ 0.91
NDE1Q9NXR1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
NDE1Q9NXR1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
NDE1Q9NXR1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 AF106564.1-201ENST00000607058 2553 ntBASIC20.76■□□□□ 0.91
NDE1Q9NXR1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 AC139795.1-202ENST00000500444 432 ntBASIC20.76■□□□□ 0.91
NDE1Q9NXR1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 AC129492.7-201ENST00000622992 756 ntBASIC20.76■□□□□ 0.91
NDE1Q9NXR1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NDE1Q9NXR1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 DUX4L4-201ENST00000566884 1269 ntBASIC20.75■□□□□ 0.91
NDE1Q9NXR1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NDE1Q9NXR1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NDE1Q9NXR1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NDE1Q9NXR1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDE1Q9NXR1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms