Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 AC026310.3-201ENST00000625186 2373 ntBASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.84■□□□□ 0.45
LIN7CQ9NUP9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LIN7CQ9NUP9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
LIN7CQ9NUP9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LIN7CQ9NUP9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 AC244015.2-201ENST00000616358 1861 ntBASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.81■□□□□ 0.44
LIN7CQ9NUP9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 DUX4L19-201ENST00000557448 1267 ntBASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LIN7CQ9NUP9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LIN7CQ9NUP9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms