Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDHAF3Q9NRP4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDHAF3Q9NRP4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 BX005040.4-201ENST00000637145 1518 ntBASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SDHAF3Q9NRP4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 GUSBP5-202ENST00000510805 1989 ntBASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDHAF3Q9NRP4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 AC009237.3-201ENST00000393279 1427 ntBASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 AP004607.7-201ENST00000527152 1677 ntBASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDHAF3Q9NRP4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 AC080038.3-201ENST00000623346 1952 ntBASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 AC027612.3-201ENST00000413684 1047 ntBASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.68■□□□□ 0.74
SDHAF3Q9NRP4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SDHAF3Q9NRP4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms