Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 IGHV3-19-201ENST00000521488 291 ntBASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN3Q9NQS3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN3Q9NQS3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
NECTIN3Q9NQS3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 AC242852.2-201ENST00000615738 1807 ntBASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN3Q9NQS3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN3Q9NQS3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 AC068587.7-201ENST00000641602 218 ntBASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.52■□□□□ 0.88
NECTIN3Q9NQS3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NECTIN3Q9NQS3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NECTIN3Q9NQS3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NECTIN3Q9NQS3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms