Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 AL354811.1-201ENST00000610286 706 ntBASIC18.46■□□□□ 0.55
MSL2Q9HCI7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 AL358852.1-201ENST00000623174 1268 ntBASIC18.46■□□□□ 0.55
MSL2Q9HCI7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MSL2Q9HCI7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.46■□□□□ 0.54
MSL2Q9HCI7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.46■□□□□ 0.54
MSL2Q9HCI7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MSL2Q9HCI7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.44■□□□□ 0.54
MSL2Q9HCI7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSL2Q9HCI7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSL2Q9HCI7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.42■□□□□ 0.54
MSL2Q9HCI7 MIR935-201ENST00000401179 91 ntBASIC18.42■□□□□ 0.54
MSL2Q9HCI7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.42■□□□□ 0.54
MSL2Q9HCI7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 AC079834.2-201ENST00000609776 1949 ntBASIC18.41■□□□□ 0.54
MSL2Q9HCI7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
MSL2Q9HCI7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 AC242852.2-201ENST00000615738 1807 ntBASIC18.4■□□□□ 0.54
MSL2Q9HCI7 BX005040.4-201ENST00000637145 1518 ntBASIC18.4■□□□□ 0.54
MSL2Q9HCI7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms