Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 AC092028.1-203ENST00000608262 953 ntBASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDC42EP4Q9H3Q1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDC42EP4Q9H3Q1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42EP4Q9H3Q1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42EP4Q9H3Q1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42EP4Q9H3Q1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42EP4Q9H3Q1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42EP4Q9H3Q1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 AL031602.1-201ENST00000633169 911 ntBASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDC42EP4Q9H3Q1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 AC079089.2-201ENST00000531211 1277 ntBASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42EP4Q9H3Q1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 MTDHP2-201ENST00000601468 714 ntBASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42EP4Q9H3Q1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 LINC01521-201ENST00000504184 1943 ntBASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDC42EP4Q9H3Q1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms