Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC055733.4-201ENST00000638462 1354 ntBASIC23.44■■□□□ 1.34
CDT1Q9H211 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CDT1Q9H211 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.44■■□□□ 1.34
CDT1Q9H211 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.44■■□□□ 1.34
CDT1Q9H211 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.44■■□□□ 1.34
CDT1Q9H211 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.44■■□□□ 1.34
CDT1Q9H211 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDT1Q9H211 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDT1Q9H211 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDT1Q9H211 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.43■■□□□ 1.34
CDT1Q9H211 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.43■■□□□ 1.34
CDT1Q9H211 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.43■■□□□ 1.34
CDT1Q9H211 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.43■■□□□ 1.34
CDT1Q9H211 AC068473.5-201ENST00000616428 2072 ntBASIC23.43■■□□□ 1.34
CDT1Q9H211 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.43■■□□□ 1.34
CDT1Q9H211 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDT1Q9H211 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CDT1Q9H211 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDT1Q9H211 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.43■■□□□ 1.34
CDT1Q9H211 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CDT1Q9H211 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDT1Q9H211 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
CDT1Q9H211 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.42■■□□□ 1.34
CDT1Q9H211 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CDT1Q9H211 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CDT1Q9H211 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.42■■□□□ 1.34
CDT1Q9H211 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
CDT1Q9H211 AC079140.4-201ENST00000507448 529 ntBASIC23.42■■□□□ 1.34
CDT1Q9H211 AL034346.1-201ENST00000568244 1277 ntBASIC23.42■■□□□ 1.34
CDT1Q9H211 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.42■■□□□ 1.34
CDT1Q9H211 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.42■■□□□ 1.34
CDT1Q9H211 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.42■■□□□ 1.34
CDT1Q9H211 AP004607.4-201ENST00000530158 1459 ntBASIC23.42■■□□□ 1.34
CDT1Q9H211 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.42■■□□□ 1.34
CDT1Q9H211 AC004854.2-201ENST00000608450 1441 ntBASIC23.42■■□□□ 1.34
CDT1Q9H211 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.41■■□□□ 1.34
CDT1Q9H211 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.41■■□□□ 1.34
CDT1Q9H211 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.41■■□□□ 1.34
CDT1Q9H211 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.41■■□□□ 1.34
CDT1Q9H211 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.41■■□□□ 1.34
CDT1Q9H211 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.41■■□□□ 1.34
CDT1Q9H211 AC022517.1-201ENST00000592429 346 ntBASIC23.41■■□□□ 1.34
CDT1Q9H211 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.41■■□□□ 1.34
CDT1Q9H211 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDT1Q9H211 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.4■■□□□ 1.34
CDT1Q9H211 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDT1Q9H211 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDT1Q9H211 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDT1Q9H211 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDT1Q9H211 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.39■■□□□ 1.34
CDT1Q9H211 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
CDT1Q9H211 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDT1Q9H211 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.39■■□□□ 1.33
CDT1Q9H211 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.39■■□□□ 1.33
CDT1Q9H211 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.39■■□□□ 1.33
CDT1Q9H211 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.39■■□□□ 1.33
CDT1Q9H211 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.39■■□□□ 1.33
CDT1Q9H211 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDT1Q9H211 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.38■■□□□ 1.33
CDT1Q9H211 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.38■■□□□ 1.33
CDT1Q9H211 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.38■■□□□ 1.33
CDT1Q9H211 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.38■■□□□ 1.33
CDT1Q9H211 IKBKGP1-201ENST00000612193 1073 ntBASIC23.38■■□□□ 1.33
CDT1Q9H211 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.38■■□□□ 1.33
CDT1Q9H211 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDT1Q9H211 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDT1Q9H211 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CDT1Q9H211 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CDT1Q9H211 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDT1Q9H211 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDT1Q9H211 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDT1Q9H211 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDT1Q9H211 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.37■■□□□ 1.33
CDT1Q9H211 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDT1Q9H211 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.37■■□□□ 1.33
CDT1Q9H211 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDT1Q9H211 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDT1Q9H211 AP006587.3-201ENST00000525742 1516 ntBASIC23.37■■□□□ 1.33
CDT1Q9H211 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDT1Q9H211 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.37■■□□□ 1.33
CDT1Q9H211 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms