Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 OR2I1P-207ENST00000453522 948 ntBASIC21.82■■□□□ 1.08
PHACTR1Q9C0D0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.82■■□□□ 1.08
PHACTR1Q9C0D0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PHACTR1Q9C0D0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PHACTR1Q9C0D0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 TSPY9P-201ENST00000440215 945 ntBASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 TSPY11P-201ENST00000442607 1045 ntBASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
PHACTR1Q9C0D0 AC026471.6-201ENST00000622954 1905 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 pRNA.6-201ENST00000610482 90 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 pRNA.5-201ENST00000612139 90 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 pRNA.11-201ENST00000618423 90 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 pRNA.13-201ENST00000619112 90 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHACTR1Q9C0D0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHACTR1Q9C0D0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 AC009299.2-201ENST00000482477 511 ntBASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHACTR1Q9C0D0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 AC006455.2-201ENST00000429931 906 ntBASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 AC087239.1-201ENST00000622671 572 ntBASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHACTR1Q9C0D0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms