Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CRNKL1Q9BZJ0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CRNKL1Q9BZJ0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CRNKL1Q9BZJ0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
CRNKL1Q9BZJ0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 KRT19P1-201ENST00000405746 1186 ntBASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CRNKL1Q9BZJ0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 KRT87P-202ENST00000534226 1464 ntBASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CRNKL1Q9BZJ0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CRNKL1Q9BZJ0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 AC004911.1-201ENST00000416316 871 ntBASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 AC137761.2-201ENST00000561729 223 ntBASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 AC145350.3-201ENST00000569033 163 ntBASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CRNKL1Q9BZJ0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CRNKL1Q9BZJ0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.64■■□□□ 1.7
CRNKL1Q9BZJ0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CRNKL1Q9BZJ0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.64■■□□□ 1.69
CRNKL1Q9BZJ0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CRNKL1Q9BZJ0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 AC016769.1-201ENST00000409132 1010 ntBASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 AP006587.3-201ENST00000525742 1516 ntBASIC25.63■■□□□ 1.69
CRNKL1Q9BZJ0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CRNKL1Q9BZJ0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms