Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RTFDC1Q9BY42 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 SLC7A5P1-201ENST00000568957 537 ntBASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RTFDC1Q9BY42 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 AC079089.2-201ENST00000531211 1277 ntBASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RTFDC1Q9BY42 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 FAM201B-201ENST00000458407 597 ntBASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RTFDC1Q9BY42 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RTFDC1Q9BY42 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.38■■□□□ 1.81
RTFDC1Q9BY42 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.38■■□□□ 1.81
RTFDC1Q9BY42 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTFDC1Q9BY42 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 ANOS2P-203ENST00000472227 1816 ntBASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RTFDC1Q9BY42 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 AC013268.1-206ENST00000638368 961 ntBASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 AC112229.1-201ENST00000639295 961 ntBASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RTFDC1Q9BY42 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTFDC1Q9BY42 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 AC068338.2-201ENST00000563278 1430 ntBASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 TERF1P5-201ENST00000477545 1207 ntBASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 MIR4758-201ENST00000577688 71 ntBASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 AC008687.6-201ENST00000596318 630 ntBASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 AC092068.2-201ENST00000590491 1708 ntBASIC26.34■■□□□ 1.81
RTFDC1Q9BY42 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 AC007322.4-201ENST00000509611 723 ntBASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.33■■□□□ 1.81
RTFDC1Q9BY42 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms