Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.1■□□□□ 0.65
USB1Q9BQ65 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USB1Q9BQ65 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USB1Q9BQ65 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USB1Q9BQ65 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
USB1Q9BQ65 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
USB1Q9BQ65 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.08■□□□□ 0.65
USB1Q9BQ65 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USB1Q9BQ65 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USB1Q9BQ65 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
USB1Q9BQ65 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.08■□□□□ 0.64
USB1Q9BQ65 AL162430.1-201ENST00000480705 870 ntBASIC19.08■□□□□ 0.64
USB1Q9BQ65 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
USB1Q9BQ65 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USB1Q9BQ65 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USB1Q9BQ65 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.08■□□□□ 0.64
USB1Q9BQ65 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USB1Q9BQ65 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.07■□□□□ 0.64
USB1Q9BQ65 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USB1Q9BQ65 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.06■□□□□ 0.64
USB1Q9BQ65 BX005040.4-201ENST00000637145 1518 ntBASIC19.05■□□□□ 0.64
USB1Q9BQ65 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USB1Q9BQ65 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USB1Q9BQ65 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USB1Q9BQ65 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 TERF1P2-201ENST00000583350 1212 ntBASIC19.05■□□□□ 0.64
USB1Q9BQ65 AC092666.2-201ENST00000613287 246 ntBASIC19.05■□□□□ 0.64
USB1Q9BQ65 MIR6084-201ENST00000622012 110 ntBASIC19.05■□□□□ 0.64
USB1Q9BQ65 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USB1Q9BQ65 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.05■□□□□ 0.64
USB1Q9BQ65 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms