Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL19Q99731 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL19Q99731 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCL19Q99731 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL19Q99731 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL19Q99731 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL19Q99731 AC010536.3-201ENST00000620306 533 ntBASIC18.28■□□□□ 0.52
CCL19Q99731 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL19Q99731 DUSP8P5-201ENST00000422884 1815 ntBASIC18.28■□□□□ 0.52
CCL19Q99731 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL19Q99731 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL19Q99731 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL19Q99731 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL19Q99731 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.27■□□□□ 0.52
CCL19Q99731 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL19Q99731 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.27■□□□□ 0.52
CCL19Q99731 KRT18P20-201ENST00000548986 1279 ntBASIC18.27■□□□□ 0.52
CCL19Q99731 AC066615.1-201ENST00000640911 628 ntBASIC18.27■□□□□ 0.52
CCL19Q99731 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL19Q99731 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCL19Q99731 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCL19Q99731 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL19Q99731 AP004607.7-201ENST00000527152 1677 ntBASIC18.27■□□□□ 0.52
CCL19Q99731 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
CCL19Q99731 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCL19Q99731 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL19Q99731 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCL19Q99731 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCL19Q99731 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL19Q99731 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL19Q99731 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL19Q99731 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 CNN2P6-201ENST00000439038 900 ntBASIC18.26■□□□□ 0.51
CCL19Q99731 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 AC079089.2-201ENST00000531211 1277 ntBASIC18.26■□□□□ 0.51
CCL19Q99731 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.26■□□□□ 0.51
CCL19Q99731 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 AC138907.5-202ENST00000569484 235 ntBASIC18.26■□□□□ 0.51
CCL19Q99731 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.26■□□□□ 0.51
CCL19Q99731 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCL19Q99731 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 LINC01960-201ENST00000563759 1884 ntBASIC18.26■□□□□ 0.51
CCL19Q99731 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL19Q99731 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL19Q99731 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL19Q99731 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCL19Q99731 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL19Q99731 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL19Q99731 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL19Q99731 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCL19Q99731 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL19Q99731 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL19Q99731 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.25■□□□□ 0.51
CCL19Q99731 AC133552.2-202ENST00000575694 574 ntBASIC18.25■□□□□ 0.51
CCL19Q99731 MIR4651-201ENST00000582622 73 ntBASIC18.25■□□□□ 0.51
CCL19Q99731 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL19Q99731 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL19Q99731 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL19Q99731 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL19Q99731 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL19Q99731 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.24■□□□□ 0.51
CCL19Q99731 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL19Q99731 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.24■□□□□ 0.51
CCL19Q99731 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCL19Q99731 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL19Q99731 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCL19Q99731 AC013268.1-206ENST00000638368 961 ntBASIC18.24■□□□□ 0.51
CCL19Q99731 AC112229.1-201ENST00000639295 961 ntBASIC18.24■□□□□ 0.51
CCL19Q99731 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL19Q99731 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL19Q99731 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL19Q99731 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.23■□□□□ 0.51
CCL19Q99731 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL19Q99731 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL19Q99731 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL19Q99731 AL034346.1-201ENST00000568244 1277 ntBASIC18.23■□□□□ 0.51
CCL19Q99731 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL19Q99731 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL19Q99731 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL19Q99731 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL19Q99731 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL19Q99731 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.22■□□□□ 0.51
CCL19Q99731 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL19Q99731 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms