Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 CYP2T1P-201ENST00000432607 1285 ntBASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 AC007322.4-201ENST00000509611 723 ntBASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NECTIN4Q96NY8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 PRORSD1P-201ENST00000295112 541 ntBASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 AC092118.2-201ENST00000613495 667 ntBASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 AP006294.2-201ENST00000641667 209 ntBASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 AC068338.2-201ENST00000563278 1430 ntBASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.45■■□□□ 1.18
NECTIN4Q96NY8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 AC008694.1-202ENST00000636953 945 ntBASIC22.44■■□□□ 1.18
NECTIN4Q96NY8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 AL139125.2-201ENST00000623134 1869 ntBASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 LINC00543-201ENST00000567234 1845 ntBASIC22.43■■□□□ 1.18
NECTIN4Q96NY8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 AL512625.2-201ENST00000417533 625 ntBASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 AC069236.1-201ENST00000604339 616 ntBASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.42■■□□□ 1.18
NECTIN4Q96NY8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 DUSP8P5-201ENST00000422884 1815 ntBASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.41■■□□□ 1.18
NECTIN4Q96NY8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NECTIN4Q96NY8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NECTIN4Q96NY8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NECTIN4Q96NY8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
NECTIN4Q96NY8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms