Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CMTM3Q96MX0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CMTM3Q96MX0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.52■□□□□ 0.55
CMTM3Q96MX0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CMTM3Q96MX0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 RNF165-205ENST00000588679 2904 ntBASIC18.51■□□□□ 0.55
CMTM3Q96MX0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
CMTM3Q96MX0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 AC139795.1-202ENST00000500444 432 ntBASIC18.5■□□□□ 0.55
CMTM3Q96MX0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CMTM3Q96MX0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.49■□□□□ 0.55
CMTM3Q96MX0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CMTM3Q96MX0 AC005703.6-201ENST00000623265 1329 ntBASIC18.49■□□□□ 0.55
CMTM3Q96MX0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.48■□□□□ 0.55
CMTM3Q96MX0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CMTM3Q96MX0 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
CMTM3Q96MX0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms