Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLCO4A1Q96BD0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SLCO4A1Q96BD0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLCO4A1Q96BD0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
SLCO4A1Q96BD0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.14■□□□□ 0.82
SLCO4A1Q96BD0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 AC010980.1-201ENST00000587192 1142 ntBASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 AC074183.2-201ENST00000623112 922 ntBASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLCO4A1Q96BD0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLCO4A1Q96BD0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLCO4A1Q96BD0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms