Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 NEFHP1-201ENST00000412845 2629 ntBASIC13.66□□□□□ -0.22
SVIPQ8NHG7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SVIPQ8NHG7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 LINC01124-201ENST00000409786 2117 ntBASIC13.64□□□□□ -0.23
SVIPQ8NHG7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SVIPQ8NHG7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 LINC00526-201ENST00000581067 1875 ntBASIC13.63□□□□□ -0.23
SVIPQ8NHG7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SVIPQ8NHG7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SVIPQ8NHG7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms