Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 PBX2P1-201ENST00000493219 1291 ntBASIC20.17■□□□□ 0.82
NUP43Q8NFH3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NUP43Q8NFH3 PKD1P6-201ENST00000343738 4769 ntBASIC20.17■□□□□ 0.82
NUP43Q8NFH3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 AC233992.3-201ENST00000607491 485 ntBASIC20.16■□□□□ 0.82
NUP43Q8NFH3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NUP43Q8NFH3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 AC010542.4-201ENST00000563151 1910 ntBASIC20.15■□□□□ 0.82
NUP43Q8NFH3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NUP43Q8NFH3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NUP43Q8NFH3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 AC126544.1-201ENST00000580842 1059 ntBASIC20.14■□□□□ 0.81
NUP43Q8NFH3 AC106739.1-201ENST00000617035 715 ntBASIC20.14■□□□□ 0.81
NUP43Q8NFH3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NUP43Q8NFH3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUP43Q8NFH3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 AC008764.7-201ENST00000593779 1081 ntBASIC20.12■□□□□ 0.81
NUP43Q8NFH3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
NUP43Q8NFH3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.11■□□□□ 0.81
NUP43Q8NFH3 AC110285.6-201ENST00000617652 491 ntBASIC20.11■□□□□ 0.81
NUP43Q8NFH3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.11■□□□□ 0.81
NUP43Q8NFH3 CLDN5-201ENST00000403084 2357 ntBASIC20.1■□□□□ 0.81
NUP43Q8NFH3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.1■□□□□ 0.81
NUP43Q8NFH3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms