Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD8Q8NEN9 AC087742.1-201ENST00000575880 1738 ntBASIC22.57■■□□□ 1.2
PDZD8Q8NEN9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDZD8Q8NEN9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDZD8Q8NEN9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 AP004607.4-201ENST00000530158 1459 ntBASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 LINC00526-201ENST00000581067 1875 ntBASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 AP004607.7-201ENST00000527152 1677 ntBASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.55■■□□□ 1.2
PDZD8Q8NEN9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 IKBKGP1-201ENST00000612193 1073 ntBASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDZD8Q8NEN9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 KRT19P1-201ENST00000405746 1186 ntBASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 AC004854.2-201ENST00000608450 1441 ntBASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 AC137767.1-201ENST00000602918 1920 ntBASIC22.53■■□□□ 1.2
PDZD8Q8NEN9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 KRT18P61-201ENST00000585825 1298 ntBASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDZD8Q8NEN9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 AC092437.1-201ENST00000624794 1048 ntBASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PDZD8Q8NEN9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 KRT87P-202ENST00000534226 1464 ntBASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDZD8Q8NEN9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 ESRRAP2-201ENST00000418437 1549 ntBASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDZD8Q8NEN9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms