Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF248Q8NDW4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 AC104187.1-201ENST00000607510 612 ntBASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF248Q8NDW4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 KRT87P-202ENST00000534226 1464 ntBASIC20.56■□□□□ 0.88
ZNF248Q8NDW4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 AC073210.2-201ENST00000430369 194 ntBASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF248Q8NDW4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF248Q8NDW4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 AC004687.1-201ENST00000579003 1625 ntBASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 AF201337.1-201ENST00000520239 748 ntBASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 UBE2DNL-204ENST00000602536 740 ntBASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.53■□□□□ 0.88
ZNF248Q8NDW4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 AC008687.6-201ENST00000596318 630 ntBASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF248Q8NDW4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF248Q8NDW4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.52■□□□□ 0.87
ZNF248Q8NDW4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF248Q8NDW4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF248Q8NDW4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms