Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 AL136116.3-201ENST00000402907 1138 ntBASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.72■□□□□ 0.75
LSMEM1Q8N8F7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSMEM1Q8N8F7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSMEM1Q8N8F7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.69■□□□□ 0.74
LSMEM1Q8N8F7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSMEM1Q8N8F7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSMEM1Q8N8F7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSMEM1Q8N8F7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 AC131212.1-201ENST00000613771 668 ntBASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSMEM1Q8N8F7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms