Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX53Q86TM3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX53Q86TM3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX53Q86TM3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX53Q86TM3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX53Q86TM3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX53Q86TM3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX53Q86TM3 AP004607.7-201ENST00000527152 1677 ntBASIC22.97■■□□□ 1.27
DDX53Q86TM3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX53Q86TM3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX53Q86TM3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.96■■□□□ 1.27
DDX53Q86TM3 SLC7A5P2-201ENST00000553010 536 ntBASIC22.96■■□□□ 1.27
DDX53Q86TM3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX53Q86TM3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX53Q86TM3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX53Q86TM3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.96■■□□□ 1.27
DDX53Q86TM3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX53Q86TM3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.96■■□□□ 1.27
DDX53Q86TM3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX53Q86TM3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX53Q86TM3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX53Q86TM3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX53Q86TM3 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.95■■□□□ 1.26
DDX53Q86TM3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.95■■□□□ 1.26
DDX53Q86TM3 AC010141.2-201ENST00000452426 721 ntBASIC22.95■■□□□ 1.26
DDX53Q86TM3 KRT18P20-201ENST00000548986 1279 ntBASIC22.95■■□□□ 1.26
DDX53Q86TM3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.95■■□□□ 1.26
DDX53Q86TM3 AC138907.5-202ENST00000569484 235 ntBASIC22.95■■□□□ 1.26
DDX53Q86TM3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX53Q86TM3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX53Q86TM3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX53Q86TM3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX53Q86TM3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.94■■□□□ 1.26
DDX53Q86TM3 GUSBP6-202ENST00000438529 1198 ntBASIC22.94■■□□□ 1.26
DDX53Q86TM3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
DDX53Q86TM3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX53Q86TM3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
DDX53Q86TM3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
DDX53Q86TM3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX53Q86TM3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.93■■□□□ 1.26
DDX53Q86TM3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX53Q86TM3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.93■■□□□ 1.26
DDX53Q86TM3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.93■■□□□ 1.26
DDX53Q86TM3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
DDX53Q86TM3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
DDX53Q86TM3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
DDX53Q86TM3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.92■■□□□ 1.26
DDX53Q86TM3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX53Q86TM3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.92■■□□□ 1.26
DDX53Q86TM3 CD99P1-205ENST00000527459 561 ntBASIC22.92■■□□□ 1.26
DDX53Q86TM3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
DDX53Q86TM3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 OR7E47P-201ENST00000546390 1422 ntBASIC22.91■■□□□ 1.26
DDX53Q86TM3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX53Q86TM3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX53Q86TM3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX53Q86TM3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 CNN2P6-201ENST00000439038 900 ntBASIC22.91■■□□□ 1.26
DDX53Q86TM3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX53Q86TM3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX53Q86TM3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX53Q86TM3 AL034346.1-201ENST00000568244 1277 ntBASIC22.9■■□□□ 1.26
DDX53Q86TM3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.9■■□□□ 1.26
DDX53Q86TM3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
DDX53Q86TM3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX53Q86TM3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
DDX53Q86TM3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
DDX53Q86TM3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX53Q86TM3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX53Q86TM3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX53Q86TM3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 SLC29A4P1-201ENST00000398760 971 ntBASIC22.89■■□□□ 1.25
DDX53Q86TM3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX53Q86TM3 AC010536.3-201ENST00000620306 533 ntBASIC22.89■■□□□ 1.25
DDX53Q86TM3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms