Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 LINC01960-201ENST00000563759 1884 ntBASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAI1Q7Z5J4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 MYCNOS-205ENST00000641950 531 ntBASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 OXCT2P1-201ENST00000447263 1535 ntBASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.49■□□□□ 0.55
RAI1Q7Z5J4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 AC231657.2-201ENST00000624556 255 ntBASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RAI1Q7Z5J4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAI1Q7Z5J4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 GPX1P1-201ENST00000388829 606 ntBASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.46■□□□□ 0.55
RAI1Q7Z5J4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.45■□□□□ 0.54
RAI1Q7Z5J4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAI1Q7Z5J4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms