Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.91■■□□□ 1.26
LIMS2Q7Z4I7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LIMS2Q7Z4I7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.89■■□□□ 1.26
LIMS2Q7Z4I7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.89■■□□□ 1.26
LIMS2Q7Z4I7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
LIMS2Q7Z4I7 AP006587.3-201ENST00000525742 1516 ntBASIC22.89■■□□□ 1.26
LIMS2Q7Z4I7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 AC104564.3-201ENST00000582367 638 ntBASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 AC092053.2-201ENST00000640557 1818 ntBASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.89■■□□□ 1.25
LIMS2Q7Z4I7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 AC004854.2-201ENST00000608450 1441 ntBASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
LIMS2Q7Z4I7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 AC079140.4-201ENST00000507448 529 ntBASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
LIMS2Q7Z4I7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 AC022517.1-201ENST00000592429 346 ntBASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LIMS2Q7Z4I7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LIMS2Q7Z4I7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms