Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SCXQ7RTU7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCXQ7RTU7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.1□□□□□ -0.15
SCXQ7RTU7 AC007375.3-201ENST00000600936 2314 ntBASIC14.1□□□□□ -0.15
SCXQ7RTU7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.1□□□□□ -0.15
SCXQ7RTU7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCXQ7RTU7 FP325331.1-202ENST00000623531 1380 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.09□□□□□ -0.15
SCXQ7RTU7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SCXQ7RTU7 AC034268.1-201ENST00000441047 882 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 OR2I1P-207ENST00000453522 948 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 DUX4L4-201ENST00000566884 1269 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 AC010525.1-201ENST00000585559 441 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
SCXQ7RTU7 AL358852.1-201ENST00000623174 1268 ntBASIC14.09□□□□□ -0.15
SCXQ7RTU7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.09□□□□□ -0.15
SCXQ7RTU7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SCXQ7RTU7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCXQ7RTU7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SCXQ7RTU7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCXQ7RTU7 AC144652.1-201ENST00000609974 1624 ntBASIC14.08□□□□□ -0.15
SCXQ7RTU7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SCXQ7RTU7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.08□□□□□ -0.15
SCXQ7RTU7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 LINC01529-204ENST00000636474 1715 ntBASIC14.08□□□□□ -0.16
SCXQ7RTU7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 MIR572-201ENST00000384983 95 ntBASIC14.08□□□□□ -0.16
SCXQ7RTU7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 MIR6084-201ENST00000622012 110 ntBASIC14.08□□□□□ -0.16
SCXQ7RTU7 AL031602.1-201ENST00000633169 911 ntBASIC14.08□□□□□ -0.16
SCXQ7RTU7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SCXQ7RTU7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SCXQ7RTU7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SCXQ7RTU7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC14.07□□□□□ -0.16
SCXQ7RTU7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.07□□□□□ -0.16
SCXQ7RTU7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.07□□□□□ -0.16
SCXQ7RTU7 AC012414.1-201ENST00000556676 535 ntBASIC14.07□□□□□ -0.16
SCXQ7RTU7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SCXQ7RTU7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCXQ7RTU7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms