Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 AC097381.1-201ENST00000429019 1296 ntBASIC20.11■□□□□ 0.81
RTL4Q6ZR62 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 AC012414.1-201ENST00000556676 535 ntBASIC20.11■□□□□ 0.81
RTL4Q6ZR62 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 MIR6821-201ENST00000617625 74 ntBASIC20.11■□□□□ 0.81
RTL4Q6ZR62 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RTL4Q6ZR62 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 MIR5787-201ENST00000611784 55 ntBASIC20.1■□□□□ 0.81
RTL4Q6ZR62 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RTL4Q6ZR62 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 AC010141.3-201ENST00000456659 717 ntBASIC20.09■□□□□ 0.81
RTL4Q6ZR62 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 LINC00565-201ENST00000562710 2331 ntBASIC20.09■□□□□ 0.81
RTL4Q6ZR62 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RTL4Q6ZR62 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.08■□□□□ 0.81
RTL4Q6ZR62 AC105233.4-201ENST00000642045 216 ntBASIC20.08■□□□□ 0.81
RTL4Q6ZR62 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL4Q6ZR62 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 AC027612.3-201ENST00000413684 1047 ntBASIC20.07■□□□□ 0.8
RTL4Q6ZR62 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL4Q6ZR62 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 YBX1P1-201ENST00000445822 960 ntBASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL4Q6ZR62 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms