Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR2Q6PJQ5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR2Q6PJQ5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
FOXR2Q6PJQ5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXR2Q6PJQ5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXR2Q6PJQ5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 MIR4767-201ENST00000582827 78 ntBASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXR2Q6PJQ5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 UNC93B3-201ENST00000308076 687 ntBASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 AC233992.3-201ENST00000607491 485 ntBASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
FOXR2Q6PJQ5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 Z98882.1-201ENST00000622160 2253 ntBASIC23.52■■□□□ 1.36
FOXR2Q6PJQ5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 AP004607.7-201ENST00000527152 1677 ntBASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.51■■□□□ 1.35
FOXR2Q6PJQ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 AC024257.2-201ENST00000549699 147 ntBASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
FOXR2Q6PJQ5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 SMUG1P1-201ENST00000590640 811 ntBASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 AL136162.1-201ENST00000607711 1078 ntBASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.49■■□□□ 1.35
FOXR2Q6PJQ5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.48■■□□□ 1.35
FOXR2Q6PJQ5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
FOXR2Q6PJQ5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms