Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 AC136469.2-201ENST00000623944 1028 ntBASIC19.57■□□□□ 0.72
NIPAL3Q6P499 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 AC135279.3-201ENST00000610945 1311 ntBASIC19.56■□□□□ 0.72
NIPAL3Q6P499 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 PBX2P1-201ENST00000493219 1291 ntBASIC19.56■□□□□ 0.72
NIPAL3Q6P499 AC024257.2-201ENST00000549699 147 ntBASIC19.56■□□□□ 0.72
NIPAL3Q6P499 CA15P2-201ENST00000611168 834 ntBASIC19.56■□□□□ 0.72
NIPAL3Q6P499 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NIPAL3Q6P499 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NIPAL3Q6P499 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 MIR4767-201ENST00000582827 78 ntBASIC19.54■□□□□ 0.72
NIPAL3Q6P499 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 AC110285.6-201ENST00000617652 491 ntBASIC19.54■□□□□ 0.72
NIPAL3Q6P499 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NIPAL3Q6P499 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NIPAL3Q6P499 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.52■□□□□ 0.72
NIPAL3Q6P499 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NIPAL3Q6P499 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NIPAL3Q6P499 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NIPAL3Q6P499 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NIPAL3Q6P499 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.51■□□□□ 0.71
NIPAL3Q6P499 OR2I1P-207ENST00000453522 948 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms