Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FAM53AQ6NSI3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
FAM53AQ6NSI3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
FAM53AQ6NSI3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FAM53AQ6NSI3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FAM53AQ6NSI3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 AC079089.2-201ENST00000531211 1277 ntBASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 AC092171.4-201ENST00000609130 632 ntBASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FAM53AQ6NSI3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 UNC93B3-201ENST00000308076 687 ntBASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FAM53AQ6NSI3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 AC026310.3-201ENST00000625186 2373 ntBASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 AC136469.2-201ENST00000623944 1028 ntBASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FAM53AQ6NSI3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FAM53AQ6NSI3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 AC011298.3-201ENST00000615796 283 ntBASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FAM53AQ6NSI3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FAM53AQ6NSI3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM53AQ6NSI3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM53AQ6NSI3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FAM53AQ6NSI3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms