Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1BQ5VTD9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1BQ5VTD9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1BQ5VTD9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GFI1BQ5VTD9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFI1BQ5VTD9 KRT8P33-201ENST00000508125 1423 ntBASIC16.77■□□□□ 0.27
GFI1BQ5VTD9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.77■□□□□ 0.27
GFI1BQ5VTD9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.77■□□□□ 0.27
GFI1BQ5VTD9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 LINC01006-201ENST00000333319 2292 ntBASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GFI1BQ5VTD9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFI1BQ5VTD9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 YBX1P4-201ENST00000392794 808 ntBASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 AC103834.1-201ENST00000520383 144 ntBASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 AC079630.1-202ENST00000618127 1840 ntBASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.74■□□□□ 0.27
GFI1BQ5VTD9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 AC010542.4-201ENST00000563151 1910 ntBASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFI1BQ5VTD9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms