Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TERF1P1-201ENST00000311003 1181 ntBASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AC016405.3-201ENST00000607710 860 ntBASIC12.04□□□□□ -0.48
UBR4Q5T4S7 OR10C1-204ENST00000622521 1039 ntBASIC12.04□□□□□ -0.48
UBR4Q5T4S7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AP001160.3-201ENST00000601484 763 ntBASIC12.04□□□□□ -0.48
UBR4Q5T4S7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 AC139530.3-201ENST00000620344 690 ntBASIC12.04□□□□□ -0.48
UBR4Q5T4S7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AC005521.1-201ENST00000393351 872 ntBASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AC096887.2-201ENST00000623443 1957 ntBASIC12.03□□□□□ -0.48
UBR4Q5T4S7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AP004609.3-201ENST00000610705 1884 ntBASIC12.03□□□□□ -0.48
UBR4Q5T4S7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
UBR4Q5T4S7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
UBR4Q5T4S7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.48
UBR4Q5T4S7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.02□□□□□ -0.48
UBR4Q5T4S7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.02□□□□□ -0.48
UBR4Q5T4S7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC12.02□□□□□ -0.48
UBR4Q5T4S7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 AL031963.3-201ENST00000606441 850 ntBASIC12.02□□□□□ -0.49
UBR4Q5T4S7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.02□□□□□ -0.49
UBR4Q5T4S7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AL450487.1-201ENST00000426799 995 ntBASIC12.01□□□□□ -0.49
UBR4Q5T4S7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AC073508.3-201ENST00000619697 1419 ntBASIC12.01□□□□□ -0.49
UBR4Q5T4S7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UBR4Q5T4S7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBR4Q5T4S7 AC244107.1-201ENST00000442033 332 ntBASIC12□□□□□ -0.49
UBR4Q5T4S7 AC092183.1-201ENST00000469884 875 ntBASIC12□□□□□ -0.49
UBR4Q5T4S7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBR4Q5T4S7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UBR4Q5T4S7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
UBR4Q5T4S7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms