Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 FAM99A-202ENST00000538190 1989 ntBASIC20.88■□□□□ 0.93
SGO1Q5FBB7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SGO1Q5FBB7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 AL137060.1-201ENST00000618151 2648 ntBASIC20.87■□□□□ 0.93
SGO1Q5FBB7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.87■□□□□ 0.93
SGO1Q5FBB7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SGO1Q5FBB7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 OR2I1P-207ENST00000453522 948 ntBASIC20.85■□□□□ 0.93
SGO1Q5FBB7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.85■□□□□ 0.93
SGO1Q5FBB7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 AL136116.3-201ENST00000402907 1138 ntBASIC20.84■□□□□ 0.93
SGO1Q5FBB7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 AC131212.1-201ENST00000613771 668 ntBASIC20.84■□□□□ 0.93
SGO1Q5FBB7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
SGO1Q5FBB7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGO1Q5FBB7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 DUX4L19-201ENST00000557448 1267 ntBASIC20.83■□□□□ 0.93
SGO1Q5FBB7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SGO1Q5FBB7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SGO1Q5FBB7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SGO1Q5FBB7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SGO1Q5FBB7 AC087239.1-201ENST00000622671 572 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms