Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TRIM60Q495X7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRIM60Q495X7 GCSHP5-201ENST00000443090 522 ntBASIC23.85■■□□□ 1.41
TRIM60Q495X7 AC093787.1-201ENST00000450396 207 ntBASIC23.85■■□□□ 1.41
TRIM60Q495X7 AC092118.2-201ENST00000613495 667 ntBASIC23.85■■□□□ 1.41
TRIM60Q495X7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TRIM60Q495X7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM60Q495X7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM60Q495X7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TRIM60Q495X7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TRIM60Q495X7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM60Q495X7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM60Q495X7 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM60Q495X7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM60Q495X7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM60Q495X7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM60Q495X7 ESRRAP1-201ENST00000400596 1257 ntBASIC23.82■■□□□ 1.4
TRIM60Q495X7 AC016405.3-201ENST00000607710 860 ntBASIC23.82■■□□□ 1.4
TRIM60Q495X7 AC083880.1-201ENST00000608266 535 ntBASIC23.82■■□□□ 1.4
TRIM60Q495X7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM60Q495X7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM60Q495X7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM60Q495X7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM60Q495X7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM60Q495X7 AL596275.1-201ENST00000423464 877 ntBASIC23.81■■□□□ 1.4
TRIM60Q495X7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TRIM60Q495X7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM60Q495X7 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM60Q495X7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM60Q495X7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM60Q495X7 OR10C1-204ENST00000622521 1039 ntBASIC23.81■■□□□ 1.4
TRIM60Q495X7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM60Q495X7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM60Q495X7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM60Q495X7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM60Q495X7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TRIM60Q495X7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.8■■□□□ 1.4
TRIM60Q495X7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.8■■□□□ 1.4
TRIM60Q495X7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
TRIM60Q495X7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 AL158047.1-201ENST00000445918 881 ntBASIC23.79■■□□□ 1.4
TRIM60Q495X7 AC007322.4-201ENST00000509611 723 ntBASIC23.79■■□□□ 1.4
TRIM60Q495X7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TRIM60Q495X7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM60Q495X7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM60Q495X7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM60Q495X7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 BX276092.2-201ENST00000417668 665 ntBASIC23.78■■□□□ 1.4
TRIM60Q495X7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.78■■□□□ 1.4
TRIM60Q495X7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms