Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 DER1YBR201W 636 nt3.93□□□□□ -1.78
VPS38Q05919 YBR292CYBR292C 372 nt3.93□□□□□ -1.78
VPS38Q05919 CET1YPL228W 1650 nt3.93□□□□□ -1.78
VPS38Q05919 DSS1YMR287C 2910 nt3.93□□□□□ -1.78
VPS38Q05919 AEP3YPL005W 1821 nt3.93□□□□□ -1.78
VPS38Q05919 MSD1YPL104W 1977 nt3.93□□□□□ -1.78
VPS38Q05919 MNT4YNR059W 1743 nt3.92□□□□□ -1.78
VPS38Q05919 RRN6YBL014C 2685 nt3.92□□□□□ -1.78
VPS38Q05919 MGA1YGR249W 1371 nt3.92□□□□□ -1.78
VPS38Q05919 YGL177WYGL177W 348 nt3.92□□□□□ -1.78
VPS38Q05919 PRP18YGR006W 756 nt3.92□□□□□ -1.78
VPS38Q05919 YML053CYML053C 639 nt3.92□□□□□ -1.78
VPS38Q05919 FYV6YNL133C 522 nt3.92□□□□□ -1.78
VPS38Q05919 SSU72YNL222W 621 nt3.92□□□□□ -1.78
VPS38Q05919 DCP1YOL149W 696 nt3.92□□□□□ -1.78
VPS38Q05919 MRPL51YPR100W 423 nt3.92□□□□□ -1.78
VPS38Q05919 DSN1YIR010W 1731 nt3.92□□□□□ -1.78
VPS38Q05919 YDR034C-CYDR034C-C 1317 nt3.92□□□□□ -1.78
VPS38Q05919 YLR410W-AYLR410W-A 1317 nt3.92□□□□□ -1.78
VPS38Q05919 SLA1YBL007C 3735 nt3.92□□□□□ -1.78
VPS38Q05919 RPS13YDR064W 456 nt3.91□□□□□ -1.78
VPS38Q05919 YDR355CYDR355C 303 nt3.91□□□□□ -1.78
VPS38Q05919 YIR023C-AYIR023C-A 324 nt3.91□□□□□ -1.78
VPS38Q05919 AIM22YJL046W 1230 nt3.91□□□□□ -1.78
VPS38Q05919 PAM18YLR008C 507 nt3.91□□□□□ -1.78
VPS38Q05919 YLR285C-AYLR285C-A 171 nt3.91□□□□□ -1.78
VPS38Q05919 TAF3YPL011C 1062 nt3.91□□□□□ -1.78
VPS38Q05919 PEX34YCL056C 435 nt3.91□□□□□ -1.78
VPS38Q05919 RTG3YBL103C 1461 nt3.91□□□□□ -1.78
VPS38Q05919 GCD1YOR260W 1737 nt3.9□□□□□ -1.78
VPS38Q05919 RAD55YDR076W 1221 nt3.9□□□□□ -1.79
VPS38Q05919 FCF1YDR339C 570 nt3.9□□□□□ -1.79
VPS38Q05919 YHR173CYHR173C 339 nt3.9□□□□□ -1.79
VPS38Q05919 tV(CAC)DtV(CAC)D 73 nt3.9□□□□□ -1.79
VPS38Q05919 tV(CAC)HtV(CAC)H 73 nt3.9□□□□□ -1.79
VPS38Q05919 ANB1YJR047C 474 nt3.9□□□□□ -1.79
VPS38Q05919 YLR156WYLR156W 345 nt3.9□□□□□ -1.79
VPS38Q05919 YLR159WYLR159W 345 nt3.9□□□□□ -1.79
VPS38Q05919 YLR161WYLR161W 345 nt3.9□□□□□ -1.79
VPS38Q05919 FLD1YLR404W 858 nt3.9□□□□□ -1.79
VPS38Q05919 ATG34YOL083W 1239 nt3.9□□□□□ -1.79
VPS38Q05919 YBR238CYBR238C 2196 nt3.9□□□□□ -1.79
VPS38Q05919 AIM21YIR003W 2040 nt3.9□□□□□ -1.79
VPS38Q05919 YNR066CYNR066C 1311 nt3.9□□□□□ -1.79
VPS38Q05919 VPS45YGL095C 1734 nt3.9□□□□□ -1.79
VPS38Q05919 SDS23YGL056C 1584 nt3.89□□□□□ -1.79
VPS38Q05919 ALA1YOR335C 2877 nt3.89□□□□□ -1.79
VPS38Q05919 SWI1YPL016W 3945 nt3.89□□□□□ -1.79
VPS38Q05919 NUP159YIL115C 4383 nt3.89□□□□□ -1.79
VPS38Q05919 IZH1YDR492W 951 nt3.89□□□□□ -1.79
VPS38Q05919 YGR026WYGR026W 837 nt3.89□□□□□ -1.79
VPS38Q05919 YGR270C-AYGR270C-A 219 nt3.89□□□□□ -1.79
VPS38Q05919 tR(UCU)Q1tR(UCU)Q1 73 nt3.89□□□□□ -1.79
VPS38Q05919 HTD2YHR067W 843 nt3.89□□□□□ -1.79
VPS38Q05919 YPT35YHR105W 645 nt3.89□□□□□ -1.79
VPS38Q05919 YIL156W-AYIL156W-A 402 nt3.89□□□□□ -1.79
VPS38Q05919 IES3YLR052W 753 nt3.89□□□□□ -1.79
VPS38Q05919 NEJ1YLR265C 1029 nt3.89□□□□□ -1.79
VPS38Q05919 CCL1YPR025C 1182 nt3.89□□□□□ -1.79
VPS38Q05919 SPT10YJL127C 1923 nt3.89□□□□□ -1.79
VPS38Q05919 UBP12YJL197W 3765 nt3.89□□□□□ -1.79
VPS38Q05919 MTR4YJL050W 3222 nt3.89□□□□□ -1.79
VPS38Q05919 CTM1YHR109W 1758 nt3.89□□□□□ -1.79
VPS38Q05919 LTV1YKL143W 1392 nt3.89□□□□□ -1.79
VPS38Q05919 CIT1YNR001C 1440 nt3.88□□□□□ -1.79
VPS38Q05919 MCD4YKL165C 2760 nt3.88□□□□□ -1.79
VPS38Q05919 YOR365CYOR365C 2112 nt3.88□□□□□ -1.79
VPS38Q05919 PRP11YDL043C 801 nt3.88□□□□□ -1.79
VPS38Q05919 BSC2YDR275W 708 nt3.88□□□□□ -1.79
VPS38Q05919 PIB1YDR313C 861 nt3.88□□□□□ -1.79
VPS38Q05919 RPS8BYER102W 603 nt3.88□□□□□ -1.79
VPS38Q05919 PFS1YHR185C 714 nt3.88□□□□□ -1.79
VPS38Q05919 PET130YJL023C 1044 nt3.88□□□□□ -1.79
VPS38Q05919 UTP11YKL099C 753 nt3.88□□□□□ -1.79
VPS38Q05919 BOS1YLR078C 735 nt3.88□□□□□ -1.79
VPS38Q05919 MOH1YBL049W 417 nt3.88□□□□□ -1.79
VPS38Q05919 RPS8AYBL072C 603 nt3.88□□□□□ -1.79
VPS38Q05919 ASI2YNL159C 870 nt3.88□□□□□ -1.79
VPS38Q05919 SIL1YOL031C 1266 nt3.88□□□□□ -1.79
VPS38Q05919 IRC13YOR235W 315 nt3.88□□□□□ -1.79
VPS38Q05919 YBR242WYBR242W 717 nt3.88□□□□□ -1.79
VPS38Q05919 EPO1YMR124W 2832 nt3.88□□□□□ -1.79
VPS38Q05919 NHP10YDL002C 612 nt3.87□□□□□ -1.79
VPS38Q05919 HIM1YDR317W 1245 nt3.87□□□□□ -1.79
VPS38Q05919 SPT15YER148W 723 nt3.87□□□□□ -1.79
VPS38Q05919 RTA1YGR213C 954 nt3.87□□□□□ -1.79
VPS38Q05919 BAT2YJR148W 1131 nt3.87□□□□□ -1.79
VPS38Q05919 AHP1YLR109W 531 nt3.87□□□□□ -1.79
VPS38Q05919 SHH3YMR118C 591 nt3.87□□□□□ -1.79
VPS38Q05919 SSO2YMR183C 888 nt3.87□□□□□ -1.79
VPS38Q05919 DUG3YNL191W 1074 nt3.87□□□□□ -1.79
VPS38Q05919 REX4YOL080C 870 nt3.87□□□□□ -1.79
VPS38Q05919 YPL168WYPL168W 1293 nt3.87□□□□□ -1.79
VPS38Q05919 YBR103C-AYBR103C-A 144 nt3.87□□□□□ -1.79
VPS38Q05919 IOC2YLR095C 2439 nt3.87□□□□□ -1.79
VPS38Q05919 GEM1YAL048C 1989 nt3.87□□□□□ -1.79
VPS38Q05919 POL1YNL102W 4407 nt3.87□□□□□ -1.79
VPS38Q05919 SEC59YMR013C 1560 nt3.86□□□□□ -1.79
VPS38Q05919 CUP1-1YHR053C 186 nt3.86□□□□□ -1.79
VPS38Q05919 CUP1-2YHR055C 186 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms